BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019F09SP1|AL427511
(704 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1782 1196 0.0
>3x_Contig1782
Length = 24703
Score = 1196 bits (592), Expect = 0.0
Identities = 628/652 (96%)
Strand = Plus / Plus
Query: 23 attccaagaattccttaatatcagckatttccttagccatttttgttaatgtacttccta 82
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 6370 attccaagaattccttaatatcagcgatttccttagccatttttgttaatgtacttccta 6429
Query: 83 gttgttgatgcttggagattcacagaaactattaagacaaaagagttaataaactgtaat 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6430 gttgttgatgcttggagattcacagaaactattaagacaaaagagttaataaactgtaat 6489
Query: 143 taawakttataaagaatactaaacaagaaccgataatacaatgtaaaawacgctaaacat 202
||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 6490 taaaagttataaagaatactaaacaagaaccgataatacaatgtaaaaaacgctaaacat 6549
Query: 203 caaaaawacactaaatggacatatacaaaacaccactattaacgacaaatgttaawwtct 262
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 6550 caaaaaaacactaaatggacatatacaaaacaccactattaacgacaaatgttaaaatct 6609
Query: 263 aawacgttaaawctgtcgatagttgttcgawactwaacgtttactggcttgccaattgca 322
|| |||||||| ||||||| |||||||||| ||| |||||||||||||||||||||||||
Sbjct: 6610 aaaacgttaaaactgtcgaaagttgttcgaaactaaacgtttactggcttgccaattgca 6669
Query: 323 caatactcaatgagcacagtcgatgagattkgtgawaagtttagttgatggtgtgtgggt 382
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 6670 caatactcaatgagcacagtcgatgagattggtgaaaagtttagttgatggtgtgtgggt 6729
Query: 383 gtcaggtggttggcttttwgagattttttgggtttctttgagtattatwctacccaattg 442
|||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 6730 gtcaggaggttggcttttagagattttttgggtttctttgagtattatactacccaattg 6789
Query: 443 agaattttctcgttttgtwtccggatgtgtgggtttttwtttttcagtgtttggtgtgta 502
|||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 6790 agaattttctcgttttgtatccggatgtgtgggtttttatttttcagtgtttggagtgta 6849
Query: 503 tgggtgttatttttacaatggacagtcctttgttaatcacgtgatttgwattctttaatc 562
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 6850 tgggtgttattttaacaatggacagtcctttgttaatcacgtgatttgaattctttaatc 6909
Query: 563 ctactattggttcaggtcacaagaatacatcacaggactagacatgccagcytcatgaat 622
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 6910 ctactattggttcaggtcacaagaatacatcacaggactagacatgccagcatcatgaat 6969
Query: 623 tagatatccattcatttactagataaccggtggggcatgattatgtgtatat 674
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6970 aagatatccattcatttactagataaccggtggggcatgattatgtgtatat 7021
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,043
Number of Sequences: 1807
Number of extensions: 12043
Number of successful extensions: 622
Number of sequences better than 1.0e-20: 1
length of query: 704
length of database: 10,358,551
effective HSP length: 16
effective length of query: 688
effective length of database: 10,329,639
effective search space: 7106791632
effective search space used: 7106791632
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 49 (99.5 bits)